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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015795569.1_cds_XP_016444690.1_3889
CDS Infomation

[gene=LOC107769941] [db_xref=GeneID:107769941] [protein=RHOMBOID-like protein 10, chloroplastic] [protein_id=XP_016444690.1] [location=complement(join(14964..15110,19696..19737,20056..20154,20581..20648,20743..20839,20919..20999,21092..21146,21392..21645,22110..22274))] [gbkey=CDS]
Sequence

ATGGAAATGGCGGGTTGGGCAGCTCTACCATCCAATAATCCAAAGTTTACCCACACATGG
GGTCCCACAACCAGCCACCTCATCACCAGCGCCGCCGCTCTCCGCCTCGGCGACTTCCTC
CACCGCCGTATCCGCCTCACTTATCTTCTTCAAACTTCTATCAAGCATATTTATTGTCAT
GGTCATGGGCCTAAATTGAAGGATGTATGGCATAAATGGACCATTGACGTTACTGGATTC
AATATCCTTCAATGGTCACAGGATGTCTTATCTGGCACGCACACGAACTTATTATTCTTC
AATGCTGATGAAAGTAGAAGGGAATTCAAACAATTTCAGAAGTCATCCTCAAAGTCGTCT
AGATCATTCTTCTCTAGTGAAAGAAAATGGACCAACATATTCCTTGCTCTTAACATATTG
GTCTATATTGCACAAGTTGCAACTGATGGAAAGCTTTTATTTTGGGGAGCCAAGATTAAT
AGTCTTATTAACAAAGGGCAACTATGGAGGCTGATTACTTCTTCATTCTTGCATGCAAAT
ATAGGCCATCTCATGGTTAATTGTTATTCGTTGAATTCTGTTGGGCCTGGTGTTGAAAAG
ATCAGTGGCCCTAGAAGATATGTTGCATTGTATTTGACATCTGCAATTGCAAGTTCAGCA
ATGAGTTACTGGCTTAGCAAGGCACCTGCAGTTGGTGCCTCAGGGGCAATCTCGGGATTA
GTTGGATCTTTTGCAGTATTTGTTTTGAGGCATAGAGGCATGGTAAAAGGCACCGAGGGG
GATCTTCGATATATAGCAAATGTGATTGTATTAAATATGGCTATTGGACTACTGAACAAA
GGGATTGACAACTGGGGACATCTTGGAGGCTTAATAGGAGGAGCAGCAGCTTCATGGCTT
CTTGGCCCAGCGTGGAAGATTCAATCCATCTCCAGTGAAGGACGACGAGTTTTTGCTGAC
ACGGCACCAATTTTCTCTATTGTTCGAACTAAAAGGGACAAGTCATAA

Peptide Sequence

PEP ID

XP_016444690.1
PEP Infomation

PREDICTED: RHOMBOID-like protein 10, chloroplastic [Nicotiana tabacum]
Sequence

MEMAGWAALPSNNPKFTHTWGPTTSHLITSAAALRLGDFLHRRIRLTYLLQTSIKHIYCH
GHGPKLKDVWHKWTIDVTGFNILQWSQDVLSGTHTNLLFFNADESRREFKQFQKSSSKSS
RSFFSSERKWTNIFLALNILVYIAQVATDGKLLFWGAKINSLINKGQLWRLITSSFLHAN
IGHLMVNCYSLNSVGPGVEKISGPRRYVALYLTSAIASSAMSYWLSKAPAVGASGAISGL
VGSFAVFVLRHRGMVKGTEGDLRYIANVIVLNMAIGLLNKGIDNWGHLGGLIGGAAASWL
LGPAWKIQSISSEGRRVFADTAPIFSIVRTKRDKS

Transcript Sequence

Gene sequence data has not been registered.